• Vector Mosquito Monitoring via biodiversity specimen/DNA data sharing
  • 1 Introduction
  • 2 Pillar Objectives
  • 3 Citizen Scientist Roles and Motivations
  • 4 Ethics
  • 5 Data Collection
  • 6 Data Processing and Validation
  • 7 Data Presentation and Use
  • 8 Data Structures and Repository Links
  • 9 Existing Tools
  • 10 Case Studies
  • References
  • Published with bookdown

Vector Mosquito Monitoring Via Biodiversity Specimen/DNA Data Sharing

Chapter 8 Data Structures and Repository Links

If possible, what are the core requirements for data structure?

See above and the tools section for details on GBIF and sequencing community norms.

What repositories should data from this pillar be sent to?

Raw sequencing data is universally mandated go in one of the three INSDC databases (NCBI, EBI, DDBJ), but there is more scope in what is done with the downstream processed data if you want to provide bulk access or use another database.

Barcoding data should ideally be deposited with Barcode of Life (http://www.boldsystems.org/), but this is brokered via the INSDC databases anyway.